MAKE提示:::malloc’ has not been declared 帖子发表于 : 2010-05-23 15

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magae
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MAKE提示:::malloc’ has not been declared 帖子发表于 : 2010-05-23 15

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帖子 magae » 2010-05-23 15:14





./configure可以过,但MAKE出现以下提示:
make all-recursive
make[1]: 正在进入目录 `/media/LUGOUGOU/bioinformatics/tophat-1.0.13'
Making all in src
make[2]: 正在进入目录 `/media/LUGOUGOU/bioinformatics/tophat-1.0.13/src'
g++ -DHAVE_CONFIG_H -I. -I.. -Wall -g -m64 -O3 -DNDEBUG -I./SeqAn-1.1 -Wall -g -m64 -O3 -DNDEBUG -MT reads.o -MD -MP -MF .deps/reads.Tpo -c -o reads.o reads.cpp
In file included from /usr/include/c++/4.4/bits/stl_algo.h:60,
from /usr/include/c++/4.4/algorithm:62,
from reads.cpp:16:
/usr/include/c++/4.4/cstdlib:119: error: ‘::malloc’ has not been declared
In file included from reads.cpp:20:
bwt_map.h: In member function ‘bool HitStream::next_read_hits(HitsForRead&)’:
bwt_map.h:586: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result
make[2]: *** [reads.o] 错误 1
make[2]:正在离开目录 `/media/LUGOUGOU/bioinformatics/tophat-1.0.13/src'
make[1]: *** [all-recursive] 错误 1
make[1]:正在离开目录 `/media/LUGOUGOU/bioinformatics/tophat-1.0.13'
make: *** [all] 错误 2
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