Chemistry Software Problem on Ubuntu 6.06 LTS

为当前最终发行版之前的所有版本提供支持
回复
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

Chemistry Software Problem on Ubuntu 6.06 LTS

#1

帖子 Beibao » 2006-07-05 5:59

Hi, I got intalling problem for chemistry software: VMD (visual molecular dynamics) and J2SE 2.4.4.12 SDK (Java 2 standard edition 2.4* software developer kit).
Also, I got problem with installing latest version mplayer.

I notice that there are some problems with the gcc complier. I tried to apt-get, but failed. The instal instruction from VMD do help to install VMD in FC5 but not the ubuntu. Anybody can help me out? Thank you very much!

Sorry, I have not got scim input chinese under english enviroment. So, I cannot write chinese at this moment.
头像
Tenyears
帖子: 2245
注册时间: 2005-06-30 15:46
来自: 成都
送出感谢: 0
接收感谢: 0

#2

帖子 Tenyears » 2006-07-05 9:22

VMD 1.84?

安装问题具体是什么?
我记得需要先
sudo apt-get install build-essential csh

除此之外安装没有任何问题,直接make,make install就行了。

然后就是显卡驱动要装好才能正常显示
Humanity to others // 己所不欲,勿施与人
Laptop: ThinkPad X220 --- Win7 Home / Ubuntu 12.04
Desktop: Win7/Ubuntu 12.04
Server: Ubuntu12.04
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

#3

帖子 Beibao » 2006-07-05 16:17

多谢楼上Tenyears的回复.
是的,是VMD 1.8.4? 我执行了
sudo apt-get install build-essential csh
但是返回的信息是
Reading package lists ... Done
Building dependency tree... Done
E: Couldn't find package csh

我安装后系统后没有改源,记得5.10的时候好像要改的..但是这个我还没有改.请问我是否还要改到那个比较好一点的源才好.
When I do ./configure, I get an error:
using configure.options: LINUX OPENGL FLTK TK ACTC IMD SACEBALL LIBTACHYON VRPN NETCDF TCL PYTHON PTHREADS NUMPY SILENT.
在configure.options里也是同样的话.
我的显卡是ATI 7500.应该是通用显卡了.在SUSE中就能正确安装的.这个版本里也正确显示出了Radeon Mobility M7 LW [Radeon Mobility 7500]

谢谢帮忙!
头像
Tenyears
帖子: 2245
注册时间: 2005-06-30 15:46
来自: 成都
送出感谢: 0
接收感谢: 0

#4

帖子 Tenyears » 2006-07-05 18:00

Beibao 写了: using configure.options: LINUX OPENGL FLTK TK ACTC IMD SACEBALL LIBTACHYON VRPN NETCDF TCL PYTHON PTHREADS NUMPY SILENT.
这不是错误信息。是正常输出,告诉你这是你所选的(默认)编译选项。
我估计安装已经没有问题了。

csh是必需的,不过不影响安装,只影响使用。
Humanity to others // 己所不欲,勿施与人
Laptop: ThinkPad X220 --- Win7 Home / Ubuntu 12.04
Desktop: Win7/Ubuntu 12.04
Server: Ubuntu12.04
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

#5

帖子 Beibao » 2006-07-05 19:11

谢谢Tenyears.但是我还是不能安装上csh,请问怎样才能安上.安装的时候说找不到csh.
谢谢你热心解答!
头像
Tenyears
帖子: 2245
注册时间: 2005-06-30 15:46
来自: 成都
送出感谢: 0
接收感谢: 0

#6

帖子 Tenyears » 2006-07-05 20:12

你换cn99的源试试,我查了一下,有。
Humanity to others // 己所不欲,勿施与人
Laptop: ThinkPad X220 --- Win7 Home / Ubuntu 12.04
Desktop: Win7/Ubuntu 12.04
Server: Ubuntu12.04
头像
Tenyears
帖子: 2245
注册时间: 2005-06-30 15:46
来自: 成都
送出感谢: 0
接收感谢: 0

#7

帖子 Tenyears » 2006-07-05 20:15

sudo apt-cache search csh

bash - The GNU Bourne Again SHell
bash-doc - Documentation and examples for the The GNU Bourne Again SHell
libgd-gd2-noxpm-perl - Perl module wrapper for libgd - gd2 variant without XPM support
libgd-gd2-perl - Perl module wrapper for libgd - gd2 variant
openssh-client - Secure shell client, an rlogin/rsh/rcp replacement
openssh-server - Secure shell server, an rshd replacement
tcsh - TENEX C Shell, an enhanced version of Berkeley csh
bash-minimal - The GNU Bourne Again SHell (minimal version)
bash-static - The GNU Bourne Again SHell (static version)
binfmtc - Execute C program as script

csh - Shell with C-like syntax, standard login shell on BSD systems
electricsheep - screensaver showing collective dream of sleeping computers
kiss - Karel's Interactive Simple Shell
ledit - line editor for interactive programs
scsh - A `scheme' interpreter designed for writing system programs (default version)
scsh-0.6 - A `scheme' interpreter designed for writing system programs
scsh-0.6-doc - Documentation for scsh, "The Scheme Shell"
scsh-common-0.6 - A `scheme' interpreter designed for writing system programs
scsh-doc - Documentation for scsh, "The Scheme Shell"
ssh-krb5 - Secure rlogin/rsh/rcp replacement (OpenSSH with Kerberos)
tcsh-kanji - TENEX C Shell, an enhanced version of Berkeley csh
zec - Z-Shell Empire client
sdic-eijiro - Installer for EIJIRO dictionaries for sdic
Humanity to others // 己所不欲,勿施与人
Laptop: ThinkPad X220 --- Win7 Home / Ubuntu 12.04
Desktop: Win7/Ubuntu 12.04
Server: Ubuntu12.04
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

#8

帖子 Beibao » 2006-07-06 2:33

excuted: sudo apt-cache search csh
Got back:

bash - The GNU Bourne Again SHell
bash-doc - Documentation and examples for the The GNU Bourne Again SHell
libgd-gd2-noxpm-perl - Perl module wrapper for libgd - gd2 variant without XPM support
libgd-gd2-perl - Perl module wrapper for libgd - gd2 variant
openssh-client - Secure shell client, an rlogin/rsh/rcp replacement
openssh-server - Secure shell server, an rshd replacement
tcsh - TENEX C Shell, an enhanced version of Berkeley csh
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

#9

帖子 Beibao » 2006-07-06 4:43

I got it once I change the new resource. Thanks!
Beibao
帖子: 14
注册时间: 2005-12-08 21:39
送出感谢: 0
接收感谢: 0

#10

帖子 Beibao » 2006-07-06 5:09

Many many great thanks to Tenyears for your kindest helps! Very helpful!
The most important thing is get the resource (cn99), which illustrates at wiki.
Then,
1. sudo apt-get install build-essential csh
2. ./configure
If you do well install your driver for your graphic card, just enjoy the VMD.

Many thanks to Tenyears again.
头像
Tenyears
帖子: 2245
注册时间: 2005-06-30 15:46
来自: 成都
送出感谢: 0
接收感谢: 0

#11

帖子 Tenyears » 2006-07-06 8:55

不客气。

接下来还有
make
make install
大概是吧
Humanity to others // 己所不欲,勿施与人
Laptop: ThinkPad X220 --- Win7 Home / Ubuntu 12.04
Desktop: Win7/Ubuntu 12.04
Server: Ubuntu12.04
回复

回到 “老旧版本支持”